SNP Profiles matching IMC 20

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 Key

 1234567891011121314
_Input profile
CTTTCCGGTTAAACCTGGGGAGTTAAGG
1._RUQ_734
CTTTCCGGTTAAACCTAGGTAGTTAAAG
2._RUQ_1748
CTTTCCGGTTAACCCTGGGGAGTTAAGG
3._RUQ_1449
CTTTCCGGTTATACCTAGGGAGTTAAAG
4._RUQ_1590
TTTTCCGGGTAACCCCGGGGAGTTAAGG
5._RUQ_1056
CTTTCCGGGTAACCCTGGGGAGTTACAA
 1516171819202122232425262728
_Input profile
AACCAACCACAAGGATACCTTTAGCCAA
1._RUQ_734
ACCCAACCACAAGGATACCTCTAGCCAA
2._RUQ_1748
AACCAACCACAGGGATACCTTTAGCCAA
3._RUQ_1449
ACCCAACCACAAGGATACCCCTAGCCAA
4._RUQ_1590
AACCAACCACAGGGATACCTTTAGCCAA
5._RUQ_1056
ACCCAACCACAGGGATACCCTTAGCCAA
 2930313233343536373839404142
_Input profile
CGTTGGGGCCTTCCAATTCCGGCGAACC
1._RUQ_734
CGTTGGGGCCTTACAATTCCGGCGAACC
2._RUQ_1748
GGTTGGGGCCTTAAATTTCCGGCCAACC
3._RUQ_1449
GGTTGGGGCTTTACATTTCCGGCGAACC
4._RUQ_1590
GGTTGGGGCTTTACATCTCCGGCCAACC
5._RUQ_1056
CGTTGGGGCCTTCCAATTCCGGCGAACC
 4344454647484950515253545556
_Input profile
CCAACCGGCTCCGTAAGTGTATAGGGGG
1._RUQ_734
CCAACCGGCTCCGTAATTGTATAGGGGG
2._RUQ_1748
CCAACCGGCTCCGGAAGTGTATAGGGCG
3._RUQ_1449
CCAACCGGCTCCGGAAGTGTATAGGGGG
4._RUQ_1590
CCAACCGGCTCCGTAAGTGTATAGGGGG
5._RUQ_1056
CCAACCGGCTCCGTAAGTGGATAAGGGG
 5758            
_Input profile
TTATX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
1._RUQ_734
TTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
2._RUQ_1748
TTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
3._RUQ_1449
TTATX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
4._RUQ_1590
TTATX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X
5._RUQ_1056
TTAAX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_XX_X

Input profile: IMC_20 RUQ_985

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

1._IMC_71 RUQ_734

93.1 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._AM_1_/57_[POU] RUQ_1748

91.4 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._IMC_31 RUQ_1449

90.5 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

4._IMC_50 RUQ_1590

90.5 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

5._IMC_67 RUQ_1056

90.5 %
58 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

 


  Key to SNP Markers

1TcSNP13 2TcSNP33 3TcSNP49 4TcSNP52 5TcSNP131
6TcSNP143 7TcSNP144 8TcSNP176 9TcSNP189 10TcSNP194
11TcSNP230 12TcSNP290 13TcSNP305 14TcSNP329 15TcSNP363
16TcSNP421 17TcSNP519 18TcSNP522 19TcSNP529 20TcSNP546
21TcSNP577 22TcSNP589 23TcSNP591 24TcSNP602 25TcSNP640
26TcSNP642 27TcSNP644 28TcSNP645 29TcSNP660 30TcSNP702
31TcSNP723 32TcSNP731 33TcSNP739 34TcSNP800 35TcSNP823
36TcSNP835 37TcSNP836 38TcSNP872 39TcSNP899 40TcSNP945
41TcSNP998 42TcSNP999 43TcSNP1010 44TcSNP1019 45TcSNP1053
46TcSNP1062 47TcSNP1112 48TcSNP1144 49TcSNP1205 50TcSNP1230
51TcSNP1253 52TcSNP1275 53TcSNP1293 54TcSNP1401 55TcSNP1404
56TcSNP1458 57TcSNP1524 58TcSNP1527